124th Meeting of the COVID-19 Advisory Board of the Ministry of Health, Labour and Welfare (August 4, 2023)Material 1
123rd Meeting of the COVID-19 Advisory Board of the Ministry of Health, Labour and Welfare (July 7, 2023)Material 1
122nd Meeting of the COVID-19 Advisory Board of the Ministry of Health, Labour and Welfare (June 16, 2023)Material 1
121st Meeting of the COVID-19 Advisory Board of the Ministry of Health, Labour and Welfare (April 19, 2023)Material 1
* The number of new cases of infection is an approximate figure per 100,000 of the population, as the total for the current week, which is the reported number in HER-SYS as of Apr. 18 at 00:00 AM (the same time point is used for the ratio to the previous week), and the use rate of beds is the secured bed use rate as of the time of the announcement on Apr. 14.
With the promotion of vaccination and natural infection, it is considered that the proportion of immune carriers against the Omicron variant (BA.5 and BQ1.1), which has shown an increase in each age group, will decrease over time in the future.
There are many regions where the nighttime population is currently decreasing compared to the level at the start of the new fiscal year. In the future, however, opportunities for contact is expected to increase due to the consecutive holidays in May.
In Japan, the BA.5 lineage, including the BQ.1 lineage, was mainstream, but its proportion has tended to decrease since around March. On the other hand, the proportions of the XBB.1.5 lineage, which is frequently reported in the United States, the XBB.1.9 lineage, which is frequently reported in Europe, and the XBB lineage including the XBB.1.16 lineage, which is frequently reported in India, are on the rise. Since the number of registered variant strains is decreasing as the number of infected people in Japan decreases, caution is required when considering the proportion of variant strains.
With the temperature rising now, the climate conditions will facilitate ventilation. It is thought that a reduction of the amount of time spent indoors has a certain effect on suppressing infection; however, it should be noted that the infection may spread during this period.
Everyone must take the following basic precautions from the perspective of being aware of the epidemic of infectious disease in the community, protecting ourselves from infectious disease, and protecting people close to us as well as society from infectious disease, especially the elderly.
It has been confirmed that compared to the Delta variant, the generation time has shortened to approximately 2 days (approximately 5 days for Delta). The doubling time and incubation period have also shortened, the risk of re-infection and secondary infection after infection has increased, and the speed of infection spread is very fast. According to the reported data, pre-symptomatic transmission has probably occurred to some extent as with the previous strains.
In Japan, many cases of infection have occurred through the same opportunities as before (spending time indoors in locations with inadequate ventilation, eating and drinking, etc.), and infection is also considered to have occurred via droplets adhering to mucosa, aerosol inhalation, contact infection, etc.
It has been shown that infection with the Omicron variant may present a relatively lower risk of hospitalization or aggravation than with the Delta variant. To evaluate COVID-19, including the Omicron variant, it is necessary to assess not only the severity as a disease but also the transmissibility and the impact on medical care and society.
Concerning the death toll during the spread of infection from the end of 2021, it has been reported that COVID-19 was not the direct cause of death in quite a number of cases, compared to that during the spread of infection in the summer of 2021; for example, there were deaths due to the worsening of underlying diseases after infection with the novel coronavirus in elderly people who had been living in a facility for elderly people since before the infection. There were many cases of serious respiratory failure due to typical viral pneumonia caused by the novel coronavirus infection from the beginning of the novel coronavirus outbreak until the Delta variant epidemic. However, during the Omicron variant epidemic, it was reported that other diseases than pneumonia became the main cause of death, such as the exacerbation of underlying disease that had been present before hospitalization and the onset of other complications during hospitalization.
During the spread of infection last summer, a decrease in the rate of severe cases and an increase in the proportion of elderly people among hospitalized patients were seen, as had been seen previously, compared to the spread of infection in the summer of 2021. In addition, compared to the situation during the spread of infection since the end of 2021, the rates of mechanical ventilation/nasal high flow use and steroid prescription among the number of deaths associated with the spread of infection was lower during the summer of 2022.
Among the fatal cases of infected children who died of endogenous factors, there were some cases without any underlying diseases. Reports on the results of on-site investigations have stated that it is necessary to pay attention to neurological symptoms such as convulsions and disturbance of consciousness as well as systemic symptoms such as vomiting and poor oral intake besides respiratory symptoms.
Among the deaths that occurred at home in July and August last year, approximately 80% of the patients were 70 years and older, which is similar to the trend of all deaths during the same period. It suggests that there were also many deaths caused by factors other than COVID-19. Regarding the situation of handling known coronavirus-positive corpses, the number of cases reported monthly was the highest in December last year (2022). The proportion of deaths due to COVID-19 was approximately 30% of all deaths.
Japanese data suggest that infectious viruses are expelled in the period from 2 days before the onset of symptoms to 7-10 days after the onset, and that the mean amount of expelled infectious viruses is very high in the first 3 days after the onset of symptoms and greatly decreases to one-twentieth to one-fiftieth the amount on the day of onset after 5 days have passed, approaching the detection limit, although there are individual differences.
Concerning conventional vaccines, the infection and disease onset prevention effects of the first vaccination against the Omicron variant have been markedly reduced. The hospitalization-preventing effect is reported maintained at a certain level for the first 6 months, but subsequently decreases to 50% or less. On the other hand, it has been reported overseas that a third vaccination restores the infection-preventing, disease onset-preventing and hospitalization-preventing effects against infection with the Omicron variant, and information on how these vaccine effects are attenuated after a third vaccination has become available. Concerning the vaccine for the Omicron variant (BA.4-5), it has been reported that the preventive effect against disease onset was observed within 0 to 2 months (median 1 month) after vaccination.
The proportion of the BA.5 lineage, which was the mainstream worldwide, is declining, and on the other hand, the proportion of the XBB lineage (a recombinant of the BJ.1 lineage [a sublineage of the BA.2.10 lineage] and the BM.1.1.1 lineage [a sublineage of the BA.2.75.3 lineage]), including the XBB.1.5 lineage, is increasing currently. The proportion of the XBB.1.5 lineage, the XBB.1.9 lineage, and the XBB.1.16 lineage (all of them include sublineages) is increasing in the United States, Europe, and India, respectively. The severity of disease caused by the XBB.1.5 lineage is not higher than that caused by the BQ.1 lineage, but its clinical picture and epidemiological findings are otherwise insufficient. The clinical picture and epidemiological findings are also insufficient regarding the XBB.1.9 lineage and the XBB.1.16 lineage. It is therefore necessary to continue collecting and analyzing data on overseas situations and to continue monitoring through genome surveillance. Caution should be exercised when considering the proportion of variant strains because the number of registered variant strains is decreasing as the number of infected people decreases worldwide.
Figures (Number of new infections reported etc.) (PDF)
Updated April 21, 2023 at 9:00 am
National Institute of Infectious Diseases, Japan
*This is a provisional translation of the summary of the report entitled "kansen-denpasei no zoukaya kougenseino henkaga kenensareru SARS-CoV-2 no henikabunituite (dai27hou) (https://www.niid.go.jp/niid/ja/2019-ncov/2551-cepr/11879-sars-cov-2-27.html)". In the case of any dispute over translation, Japanese text prevails.
Overview of SARS-CoV-2 variants
The Omicron variant, along with its B.1.1.529 lineage and descendant sub-lineages, remains dominant globally among SARS-CoV-2 variants, and there have been no significant changes in epidemiological trends since the No. 26 report. Several sub-variants and recombinant omicron variants have been reported. The WHO has classified XBB.1.5 as a currently circulating variant of interest (VOI) and BA.2.75, CH.1.1, BQ.1, XBB, XBB.1.16, XBB.1.9.1, and XBF as currently circulating variants under monitoring (VUMs) since April 12, 2023.
However, there were no significant changes in viral characteristics, such as severity and infectivity/transmissibility, apart from an increase in the number of infected cases and the possibility of immune escape between subvariants. Thus, NIID continues to classify the subvariants as before. It is important to continue monitoring and collecting information on subvariant outbreaks through genomic analysis in the country and quarantine.
According to the WHO weekly epidemiological updates on COVID-19 (April 13, 2022), 47.9% of XBB.1.5 sequences, 7.6% of XBB.1.9.1 and 17.6% of the other XBB variant (excluding XBB.1.5, XBB.1.16, and XBB.1.9.1) were reported in the 12th week of 2023 (March 20-26, 2023).
In Japan, BA.5 replaced BA.2 around July 2022, and the relative sequence prevalence among circulating variants has been dominated by BA.5, followed by an increasing proportion of BQ.1 (a sub-lineage of the BA.5.3 lineage) and BA.2.75 (a sub-lineage of the BA.2 lineage) since October 2022. The proportion of XBB variants has increased since January 2023.
Some subvariants, such as BQ.1 and XBB, exhibit characteristic mutations in the spike protein that allow the virus to evade neutralizing antibodies generated through vaccination or previous infection and may have a growth advantage. Some subvariants, such as XBB.1.5 in North America, XBB.1.9 in Europe, and XBB.1.16 in India, may have a growth advantage over existing sub-lineages in certain regions. However, there is no evidence that these variants spread more rapidly than other variants.
Omicron sub-variants have emerged with specific characteristics that primarily contribute to immune escape. There were no significant differences compared with the other variants, except for this feature. Global immunity and several public health interventions in each country have resulted in less of an impact of the variant-specific nature on epidemic dynamics. Regular monitoring of variant prevalence and changes in variant-specific features, including pathogenicity, virulence, transmissibility, vaccine and antiviral resistance, and clinical presentation, is crucial for determining appropriate interventions and rapid risk assessment for each variant.
120th Meeting of the COVID-19 Advisory Board of the Ministry of Health, Labour and Welfare (April 5, 2023)Material 1
* The number of new cases of infection is an approximate figure per 100,000 of the population, as the total for the current week, which is the reported number in HER-SYS as of Apr. 4, 00:00 AM (the same time point is used for the ratio to the previous week), and the use rate of beds is the secured bed use rate as of the time of announcement on Mar. 31.
With the promotion of vaccination and natural infection, the proportion of immune carriers against the Omicron variant (BA.5 and BQ1.1), which has shown an increase in each age group, is thought to decrease over time in the future.
The nighttime population is currently decreasing in some regions, while it is increasing in other areas such as the Tokyo metropolitan area. The number of opportunities for contact is expected to continue to increase due to spring vacation and the new fiscal year.
In Japan, the BA.5 lineage was mainstream, but its proportion has tended to decrease since around March. The proportions of the XBB lineage, including the XBB1.5 lineage which is frequently reported in Europe and the United States, and the BN.1.3 lineage, which is a sub-lineage of the BA2.75 lineage, are on an increasing trend. On the other hand, the BQ.1 lineage, which was increasing in number and proportion in Japan, has been decreasing since peaking in early January. However, since the number of registered mutant strains is decreasing as the number of infected people in Japan decreases, caution is required when considering the proportion of mutant strains.
With the temperature rising now, the climate conditions will facilitate ventilation. It is thought that a reduction of the amount of time spent indoors has a certain effect on suppressing infection; however, it should be noted that the infection may spread during this period.
With support of the national government, local governments continue to take measures to avoid overcrowding of hospital beds, fever clinics, etc.
Everyone must take the following basic precautions from the perspective of being aware of the epidemic of infectious disease in the community, protecting ourselves from infectious disease, and protecting people close to us as well as society from infectious disease, especially the elderly.
It has been confirmed that compared to the Delta variant, the generation time has shortened to approximately 2 days (approximately 5 days for Delta). The doubling time and incubation period have also shortened, the risk of re-infection and secondary infection after infection has increased, and the speed of infection spread is very fast. According to the reported data, pre-symptomatic transmission has probably occurred to some extent as with the previous strains.
In Japan, many cases of infection have occurred through the same opportunities as before (spending time indoors in locations with inadequate ventilation, eating and drinking, etc.), and infection is also considered to have occurred via droplets adhering to mucosa, aerosol inhalation, contact infection, etc.
It has been shown that infection with the Omicron variant may present a relatively lower risk of hospitalization or aggravation than with the Delta variant. To evaluate COVID-19, including the Omicron variant, it is not only necessary to assess the severity as a disease but also of the transmissibility and the impact on the medical care system and society as a whole.
Concerning the death toll since the outbreak at the end of 2021, it is reported that the novel coronavirus is not the direct cause of death in quite a number of cases compared to the epidemic in the summer of 2021; for example, when elderly people who had been living in a facility for elderly people since before the infection were infected and died, the death was due to worsening of the underlying disease. There were many cases of serious respiratory failure due to typical viral pneumonia caused by the novel coronavirus infection from the beginning of the novel coronavirus outbreak until the outbreak of the Delta variant. However, during the Omicron variant outbreak, it was reported that diseases other than pneumonia became the main causes of death, such as exacerbation of the underlying disease that had been present before hospitalization and the onset of other complications during hospitalization.
Concerning the spread of infection last summer, there has been a continuing decrease in the rate of severe cases and increase in the ratio of elderly people among hospitalized patients as during the previous outbreak compared to the spread of the infection in the summer of 2021. Compared to the spread of infection from the end of 2021, the number of deaths in the spread of infection last summer is lower than the rate of mechanical ventilation/nasal high flow use and the steroid prescription rate.
Among the fatal cases of infected children who died of endogenous factors, there were some cases without any underlying diseases. The reports on the results of on-site investigations have stated that it is necessary to pay attention to neurological symptoms such as convulsions and disturbance of consciousness, and systemic symptoms such as vomiting and poor oral intake besides the respiratory symptoms.
Among the deaths that occurred at home in July and August last year, approximately 80% of the patients were 70 years and older, which is similar to the trend of all deaths during the same period. It suggests that there were also many deaths caused by factors other than COVID-19. Regarding the situation of handling dead bodies known to be coronavirus positive, the number of cases reported monthly was the highest last December. The proportion of deaths due to COVID-19 has reached approximately 30% of all deaths.
According to Japanese data, the risk of infection remains until 10 days after the onset, and infectivity is high until 7 days after the onset. Even after waiting for 5 days, a third of the patients are still shedding infectious viruses. On Day 8 (after isolation for 7 days), most patients (approximately 85%) did not shed infectious viruses, and it was reported that even if patients did shed the virus, the amount of virus decreased to one-sixth that in the initial stage of onset after 7 days.
Concerning the conventional vaccine, the infection and disease onset prevention effects of the first vaccination against the Omicron variant are markedly reduced. The hospitalization-preventing effect is reported maintained at a certain level for the first 6 months, but subsequently decreases to 50% or less. On the other hand, it has been reported overseas that a third vaccination restores the infection-preventing, disease onset-preventing and hospitalization-preventing effects against infection with the Omicron variant, and information on how these vaccine effects are attenuated after a third vaccination has become available. Concerning the vaccine against the Omicron variant (BA.4-5), it has been reported that the preventive effect against disease onset was observed within 0 to 2 months (median 1 month) after vaccination.
The proportion of the BA.5 lineage, which was the mainstream worldwide, is declining, and currently the proportion of the XBB lineage (the BJ.1 lineage [a sublineage of the BA.2.10 lineage]), including the XBB.1.5 lineage is seen to be increasing. Increases in the number and proportion have been observed in the United States in the XBB.1.5 lineage, which is a sublineage of the XBB lineage, and in Europe and the United States in the XBB.1.9 lineage (including sublineages in both). Although the severity of the XBB.1.5 lineage is not greater than that of the BQ.1 lineage, otherwise the clinical picture and epidemiological findings are insufficient. While the clinical picture and epidemiological findings on the XBB.1.9 lineage are not yet sufficient, it is necessary to continue collecting and analyzing data on overseas situations, and to continue monitoring by genome surveillance. However, since the number of registered mutant strains is decreasing as the number of infected people decreases worldwide, caution is required when considering the proportion of mutant strains.
Figures (Number of new infections reported etc.) (PDF)
119th Meeting of the COVID-19 Advisory Board of the Ministry of Health, Labour and Welfare (March 23, 2023)Material 1
* The number of new cases of infection is an approximate figure per 100,000 of the population, as the total for the current week, which is the reported number in HER-SYS as of Mar. 22, 00:00 AM (the same time point is used for the ratio to the previous week), and the use rate of beds is the secured bed use rate as of the time of writing this document on Mar. 22.
With the promotion of vaccination and natural infection, the proportion of immune carriers against the Omicron variant (BA.5 and BQ1.1), which has shown an increase in each age group, is thought to decrease over time in the future.
The nighttime population is currently trending downward in many regions, but there are also regions where it is increasing. In addition, the number of opportunities for contact is expected to increase due to spring vacation and the new fiscal year.
Currently, the BA.5 lineage is the mainstream in Japan, but sublineages of the Omicron variant such as BQ.1 and XBB lineages, particularly XBB.1.5, which has been reported mainly in the US, are considered to have an enhanced ability to escape the immune system, and have been pointed out to predominate among the increasing number of infected people overseas. The BQ.1 lineage, which was increasing in number and proportion in Japan, has been decreasing since peaking in early January. On the other hand, it is estimated that the proportions of the BQ.1 and XBB.1.5 lineages will increase in the future, and close attention is needed. The proportion of the BN.1.3 lineage, which is a sublineage of the BA.2.75 lineage, has also been increasing in Japan.
Ventilation is difficult on days with low temperatures. Attention should also be paid to respiratory viral infections.
Everyone must take the following basic precautions from the perspective of being aware of the epidemic of infectious disease in the community, protecting ourselves from infectious disease, and protecting people close to us as well as society from infectious disease, especially the elderly.
It has been confirmed that compared to the Delta variant, the generation time has shortened to approximately 2 days (approximately 5 days for Delta). The doubling time and incubation period have also shortened, the risk of re-infection and secondary infection after infection has increased, and the speed of infection spread is very fast. According to the reported data, pre-symptomatic transmission has probably occurred to some extent as with the previous strains.
In Japan, many cases of infection have occurred through the same opportunities as before (spending time indoors in locations with inadequate ventilation, eating and drinking, etc.), and infection is also considered to have occurred via droplets adhering to mucosa, aerosol inhalation, contact infection, etc.
It has been shown that infection with the Omicron variant may present a relatively lower risk of hospitalization or aggravation than with the Delta variant. To evaluate COVID-19, including the Omicron variant, it is not only necessary to assess the severity as a disease but also of the transmissibility and the impact on the medical care system and society as a whole.
Concerning the death toll since the outbreak at the end of 2021, it is reported that the novel coronavirus is not the direct cause of death in quite a number of cases compared to the epidemic in the summer of 2021; for example,when elderly people who had been living in a facility for elderly people since before the infection were infected and died, the death was due to worsening of the underlying disease. There were many cases of serious respiratory failure due to typical viral pneumonia caused by the novel coronavirus infection from the beginning of the novel coronavirus outbreak until the outbreak of the Delta variant. However, during the Omicron variant outbreak, it was reported that diseases other than pneumonia became the main causes of death, such as exacerbation of the underlying disease that had been present before hospitalization and the onset of other complications during hospitalization.
Concerning the spread of infection last summer, there has been a continuing decrease in the rate of severe cases and increase in the ratio of elderly people among hospitalized patients as during the previous outbreak compared to the spread of the infection in the summer of 2021. Compared to the spread of infection from the end of 2021, the number of deaths in the spread of infection last summer is lower than the rate of mechanical ventilation/nasal high flow use and the steroid prescription rate.
Among the fatal cases of infected children who died of endogenous factors, there were some cases without any underlying diseases. The reports on the results of on-site investigations have stated that it is necessary to pay attention to neurological symptoms such as convulsions and disturbance of consciousness, and systemic symptoms such as vomiting and poor oral intake besides the respiratory symptoms.
Among the deaths that occurred at home in July and August last year, approximately 80% of the patients were 70 years and older, which is similar to the trend of all deaths during the same period. It suggests that there were also many deaths caused by factors other than COVID-19. Regarding the situation of handling dead bodies known to be coronavirus positive, the number of cases reported monthly has been the highest during last December. The proportion of deaths due to COVID-19 has reached approximately 30% of all deaths.
According to Japanese data, the risk of infection remains until 10 days after the onset, and infectivity is high until 7 days after the onset. Even after waiting for 5 days, a third of the patients are still shedding infectious viruses. On Day 8 (after isolation for 7 days), most patients (approximately 85%) did not shed infectious viruses, and it was reported that even if patients did shed the virus, the amount of virus decreased to one-sixth that in the initial stage of onset after 7 days.
Concerning the conventional vaccine, the infection and disease onset prevention effects of the first vaccination against the Omicron variant are markedly reduced. The hospitalization-preventing effect is reported maintained at a certain level for the first 6 months, but subsequently decreases to 50% or less. On the other hand, it has been reported overseas that a third vaccination restores the infection-preventing, disease onset-preventing and hospitalization-preventing effects against infection with the Omicron variant, and information on how these vaccine effects are attenuated after a third vaccination has become available. Concerning the vaccine against the Omicron variant (BA.4-5), it has been reported that the preventive effect against disease onset was observed within 0 to 2 months (median 1 month) after vaccination.
While the BA.5 lineage continues to be mainstream in the world, its proportion has been decreasing slightly, and other sublineages and recombinants of the Omicron variant with characteristic mutations in the spike protein have been reported worldwide. In particular, the proportions of the XBB lineage (a recombinant of the BJ.1 lineage (a sublineage of the BA.2.10 lineage) and the BM.1.1.1 lineage (a sublineage of the BA.2.75.3 lineage)) and the XBF lineage (a recombinant of the BA.5.2.3 lineage and the CJ.1 lineage (a sublineage of BA.2.75.3 lineage)) have increased relatively. The numbers and proportions of the XBB.1.5 lineage, which is a sublineage of the XBB lineage, have increased in the United States, as have the XBF lineage in Australia, and the XBB.1.9 strain (including sublineages) in Europe and the United States. Although the clinical picture and epidemiological findings on the XBB.1.9 lineage are not yet sufficient, it is necessary to continue collecting and analyzing data on overseas situations and findings regarding the characteristics of these new sublineages and recombinants, and to continue monitoring by genome surveillance.
Figures (Number of new infections reported etc.) (PDF)
Updated March 24, 2023, at 9:00 am
National Institute of Infectious Diseases, Japan
*This is a provisional translation of the summary of the report entitled "kansen-denpasei no zoukaya kougenseino henkaga kenensareru SARS-CoV-2 no henikabunituite (dai26hou) (https://www.niid.go.jp/niid/ja/2019-ncov/2551-cepr/11879-sars-cov-2-26.html)". In the case of any dispute over translation, Japanese text prevails.
Overview of SARS-CoV-2 variants
The Omicron, the B.1.1.529, and its descendent lineages are still dominant globally among SARS-CoV-2 variants, with no significant changes in epidemiological trends compared to the No. 25 report. The World Health Organization (WHO) refers to all B.1.1.529 sub-lineages and recombinants as Omicron, whereas NIID has classified omicron variants as variants of concern (VOCs).
The omicron variants are genetically divergent, and WHO and European Centre for Disease Prevention and Control (ECDC) have classified them as variants under monitoring (VUM), variants of interest (VOIs), and VOCs. The WHO has classified XBB.1.5 as currently circulating variants of interest (VOIs), and BQ.1, BA.2.75, CH.1.1, XBB and XBF as currently circulating variants under monitoring (VUMs), respectively, since March 15. However, the information lacks significant changes in viral characteristics such as severity or infectivity/transmissibility, apart from the predominance of the increased number of infected cases and the possibility of immune escape between subvariants. Thus, NIID continues the current classification of the subvariants. It is important to continue monitoring and collecting information on sub-variant outbreaks through genomic analysis in the country and quarantine.
They accounted for 98.4% of the sequences submitted to GISAID from February 13 to March 13, with few reports of other lineages (WHO, 2023). The XBB variant accounted for 44.8% of the detected subvariants and became dominant in five of the six WHO regions, except the Western Pacific region, in the 8th week of 2023 (February 20-26).
The top three variants globally were XBB.1.5 (35.1%), BQ.1 (15.1%), and XBB, excluding XBB.1.5 (9.7) (WHO, 2023). In Japan, BA.5 replaced BA.2 around July 2022, and the relative sequence prevalence among circulating variants has been dominated by BA.5, followed by an increasing proportion of BQ.1 (a sub-lineage of the BA.5.3 lineage) and BA.2.75 (a sub-lineage of the BA.2 lineage) since October 2022.
Some subvariants, such as BQ.1 and XBB, exhibit characteristic mutations in the spike protein that allow the virus to evade neutralizing antibodies through vaccination, infection, and/or show a growth advantage. Some subvariants, such as XBB.1.5, are increasing in North America and may have a growth advantage over existing sub-lineages in certain regions. However, there were no findings that they spread more rapidly than the other variants.
Omicron subvariants have emerged with specific characteristics that primarily contribute to immune escape. There were no significant differences from the other variants except for them. Global immune status and some public health interventions in each country have resulted in less influence of variant-specific nature on epidemic dynamics. It is crucial to determine appropriate interventions based on regular monitoring of variant prevalence and changes in variant-specific features, including virulence, transmissibility, vaccine and antiviral resistance, clinical presentation, and rapid risk assessment for each variant.
COVID-19 surge has been reported in China since November 2022. China decided to cease the zero-COVID-19 policy on December 7, 2022. The number of daily cases started increasing in late December 2022, and there was a late increase in severe or hospitalized patients in early January 2023. Recent reports have demonstrated a decreasing trend in the number of daily cases. According to sequences submitted to GISAID from China, BA.5.2.48 and BF.7.14 were considered dominant. These subvariants are thought to have no significant effect on immune escape, transmissibility, and severity compared with BA.5.2 and BF.7, which have already been detected in Japan.
Japan conducted screening tests for all passengers with a travel history of China (excluding Hong Kong and Macau) (within seven days) and all passengers directly from China (excluding Hong Kong and Macau) as they arrived from December 30, 2022. These test results revealed that BA.5.2 and BF.7 are dominant in these passengers from China. The quarantine testing policy has changed since March 1 to test a maximum of 20% of the samples from passengers from China (excluding Hong Kong and Macau).
118th Meeting of the COVID-19 Advisory Board of the Ministry of Health, Labour and Welfare (March 8, 2023) Material 1
*The number of new cases of infection is an approximate figure per 100,000 of the population, as the total for the current week, which is the reported number in HER-SYS as of Mar. 7, 00:00 AM (the same time point is used for the ratio to the previous week), and the use rate of beds is the secured bed use rate as of the time of writing this document on Mar. 7.
With the promotion of vaccination and natural infection, the proportion of immune carriers against the Omicron variant (BA.5 and BQ1.1) shows an increase in each age group, and it has been reported that the percentage is increasing particularly in the elderly population because of vaccination. However, immunity acquired from vaccination and natural infection may decline over time.
The nighttime population has been flat overall, although it has lately increased or decreased in some regions.
Currently, the BA.5 lineage is the mainstream in Japan, but sublineages of the Omicron variant such as BQ.1 and XBB lineages, particularly XBB.1.5, which has been reported mainly in the US, are considered to have an enhanced ability to escape the immune system, and have been pointed out to predominate among the increasing number of infected people overseas. In Japan, the proportion of the BQ.1 lineage showed an increasing trend before but has been decreasing for 3 consecutive weeks. On the other hand, the proportion of the XBB.1.5 lineage seems to be increasing, and therefore attention needs to be paid. The proportion of the BN.1.3 lineage, which is a sublineage of the BA.2.75 lineage, has also been increasing in Japan.
Days with low temperatures nationwide make ventilation difficult. Attention should also be paid to respiratory viral infections.
With support of the national government, local governments are required to take measures to avoid overcrowding of hospital beds, fever clinics, etc.
Re-inspection and implementation of the following basic infection control measures are needed.
It has been confirmed that compared to the Delta variant, the generation time has shortened to approximately 2 days (approximately 5 days for Delta). The doubling time and incubation period have also shortened, the risk of re-infection and secondary infection after infection has increased, and the speed of infection spread is very fast. According to the reported data, pre-symptomatic transmission has probably occurred to some extent as with the previous strains.
In Japan, many cases of infection have occurred through the same opportunities as before (spending time indoors in locations with inadequate ventilation, eating and drinking, etc.), and infection is also considered to have occurred via droplets adhering to mucosa, aerosol inhalation, contact infection, etc.
It has been shown that infection with the Omicron variant may present a relatively lower risk of hospitalization or aggravation than with the Delta variant. To evaluate COVID-19, including the Omicron variant, it is not only necessary to assess the severity as a disease but also of the transmissibility and the impact on the medical care system and society as a whole.
Concerning the death toll since the outbreak at the end of 2021, it is reported that the novel coronavirus is not the direct cause of death in quite a number of cases compared to the epidemic in the summer of 2021; for example, when elderly people who had been living in a facility for elderly people since before the infection were infected and died, the death was due to worsening of the underlying disease. There were many cases of serious respiratory failure due to typical viral pneumonia caused by the novel coronavirus infection from the beginning of the novel coronavirus outbreak until the outbreak of the Delta variant. However, during the Omicron variant outbreak, it was reported that other diseases than pneumonia became the main causes of death, such as exacerbation of the underlying disease that had been present before hospitalization and the onset of other complications during hospitalization.
Concerning the spread of infection last summer, there has been a continuing decrease in the rate of severe cases and increase in the ratio of elderly people among hospitalized patients as during the previous outbreak compared to spreading of the infection in the summer of 2021. Among the deaths during the 2022 summer outbreak, mechanical ventilation/nasal high flow use rates and steroid prescription rates were decreased compared to the end of 2021 outbreak.
Among the fatal cases of infected children who died of endogenous factors, there were some cases without any underlying diseases. The reports on the results of on-site investigations have stated that it is necessary to pay attention to neurological symptoms such as convulsions and disturbance of consciousness, and systemic symptoms such as vomiting and poor oral intake besides the respiratory symptoms.
Among the deaths that occurred at home in July and August last year, approximately 80% of the patients were 70 years and older, which is similar to the trend of all deaths during the same period. It suggests that there were also many deaths caused by factors other than COVID-19. Regarding the situation of handling dead bodies known to be coronavirus positive, the number of cases reported monthly has been the highest during last December. The proportion of deaths due to COVID-19 has recently reached approximately 30% of all deaths.
According to Japanese data, the risk of infection remains until 10 days after the onset, and infectivity is high until 7 days after the onset. Even after waiting for 5 days, a third of the patients are still shedding infectious viruses. On Day 8 (after isolation for 7 days), most patients (approximately 85%) did not shed infectious viruses, and it was reported that even if patients did shed the virus, the amount of virus decreased to one-sixth that in the initial stage of onset after 7 days.
Concerning the conventional vaccine, the infection and disease onset prevention effects of the first vaccination against the Omicron variant are markedly reduced. The hospitalization-preventing effect is reported maintained at a certain level for the first 6 months, but subsequently decreases to 50% or less. On the other hand, it has been reported overseas that a third vaccination restores the infection-preventing, disease onset-preventing and hospitalization-preventing effects against infection with the Omicron variant, and information on how these vaccine effects are attenuated after a third vaccination has become available. Concerning the vaccine against the Omicron variant (BA.4-5), it has been reported that the preventive effect against disease onset was observed within 0 to 2 months (median 1 month) after vaccination.
While the BA.5 lineage continues to be mainstream in the world, its proportion has been decreasing slightly, and other sublineages and recombinants of the Omicron variant with characteristic mutations in the spike protein have been reported worldwide. In particular, the proportions of the XBB lineage (a recombinant of the BJ.1 lineage (a sublineage of the BA.2.10 lineage) and the BM.1.1.1 lineage (a sublineage of the BA.2.75.3 lineage)) and the XBF lineage (a recombinant of the BA.5.2.3 lineage and the CJ.1 lineage (a sublineage of BA.2.75.3 lineage)) has increased relatively. An increase in proportion has been observed for the XBB.1.5 lineage (a sublineage of XBB lineage) in the US and for the XBF lineage in Australia and other countries. According to the World Health Organization (WHO), etc., it has been pointed out that a predominance of the XBB.1.5 lineage among the increasing number of infected people may be attributed to its ability to escape the immune system, but no findings demonstrating an increased severity in patients infected with the XBB.1.5 lineage has been obtained so far. There are also no clear findings on the BN.1.3 lineage, which has been increasing in Japan. It is necessary to continue collecting and analyzing data on overseas situations and findings regarding the characteristics of these new sublineages and recombinants, and to continue monitoring by genome surveillance.
Figures (Number of new infections reported etc.) (PDF)
117th Meeting of the COVID-19 Advisory Board of the Ministry of Health, Labour and Welfare (February 22, 2023) Material 1
* The number of new cases of infection is an approximate figure per 100,000 of the population, as the total for the current week, which is the reported number in HER-SYS as of Feb 21, 00:00 AM (the same time point is used for the ratio to the previous week), and the use rate of beds is the secured bed use rate as of the writing of this document on Feb 21.
< Changes in the number of new cases of infection and comparison to the previous week (nationwide) >
With the promotion of vaccination and natural infection, the proportion of immune carriers against the Omicron variant (BA.5 and BQ1.1) shows an increase in each age group, and it has been reported that the percentage is increasing particularly in the elderly population because of vaccination. However, immunity acquired from vaccination and natural infection may decline over time.
The nighttime population has recently increased in many areas but has decreased in some regions, showing regional differences.
Currently, the BA.5 lineage is the mainstream in Japan, but sublineages of the Omicron variant such as BQ.1 and XBB lineages, particularly XBB.1.5, which has been reported mainly in the US, are considered to have an enhanced ability to escape the immune system, and have been pointed out to predominate among the increasing number of infected people overseas. Particularly regarding the BQ.1 lineage, the proportion is increasing domestically, and close attention is required. The proportion of BN.1.2 and BN.1.3 lineages, which are sublineages of the BA.2.75 lineage, has also increased in Japan.
With the winter season, temperatures are dropping nationwide, making ventilation difficult. Respiratory virus infections also tend to be prevalent in winter.
In winter, it is also the time when the number of patients with diseases other than COVID-19 increase. With the support of the national government, prefectural governments must take measures to avoid overcrowding of hospital beds and fever outpatient clinics.
Re-inspection and implementation of the following basic infection control measures are needed.
It has been confirmed that compared to the Delta variant, the generation time has shortened to approximately 2 days (approximately 5 days for Delta). The doubling time and incubation period have also shortened, the risk of re-infection and secondary infection after infection has increased, and the speed of infection spread is very fast. According to the reported data, pre-symptomatic transmission has probably occurred to some extent as with the previous strains.
In Japan, many cases of infection have occurred through the same opportunities as before (spending time indoors in locations with inadequate ventilation, eating and drinking, etc.), and infection is also considered to have occurred via droplets adhering to mucosa, aerosol inhalation, contact infection, etc.
It has been shown that infection with the Omicron variant may present a relatively lower risk of hospitalization or aggravation than with the Delta variant. To evaluate COVID-19, including the Omicron variant, it is not only necessary to assess the severity as a disease but also of the transmissibility and the impact on the medical care system and society as a whole.
Concerning the death toll since the outbreak at the end of 2021, it is reported that the novel coronavirus is not the direct cause of death in quite a number of cases compared to the epidemic in the summer of 2021; for example, when elderly people who had been living in a facility for elderly people since before the infection were infected and died, the death was due to worsening of the underlying disease. There were many cases of serious respiratory failure due to typical viral pneumonia caused by the novel coronavirus infection from the beginning of the novel coronavirus outbreak until the outbreak of the Delta variant. However, during the Omicron variant outbreak, it was reported that other diseases than pneumonia became the main causes of death, such as exacerbation of the underlying disease that had been present before hospitalization and the onset of other complications during hospitalization.
Concerning the spread of infection last summer, there has been a continuing decrease in the rate of severe cases and increase in the ratio of elderly people among hospitalized patients as during the previous outbreak compared to spreading of the infection in the summer of 2021. Among the deaths during the 2022 summer outbreak, mechanical ventilation/nasal high flow use rates and steroid prescription rates were decreased compared to the end of 2021 outbreak.
Among the fatal cases of infected children who died of endogenous factors, there were some cases without any underlying diseases. The reports on the results of on-site investigations have stated that it is necessary to pay attention to neurological symptoms such as convulsions and disturbance of consciousness, and systemic symptoms such as vomiting and poor oral intake besides the respiratory symptoms.
Among the deaths that occurred at home in July and August last year, approximately 80% of the patients were 70 years and older, which is similar to the trend of all deaths during the same period. It suggests that there were also many deaths caused by factors other than COVID-19. Regarding the situation of handling dead bodies known to be coronavirus positive, the number of cases reported monthly has been the highest during last December. The proportion of deaths due to COVID-19 has recently reached approximately 30% of all deaths.
According to Japanese data, the risk of infection remains until 10 days after the onset, and infectivity is high until 7 days after the onset. Even after waiting for 5 days, a third of the patients are still shedding infectious viruses. On Day 8 (after isolation for 7 days), most patients (approximately 85%) did not shed infectious viruses, and it was reported that even if patients did shed the virus, the amount of virus decreased to one-sixth that in the initial stage of onset after 7 days.
Concerning the conventional vaccine, the infection and disease onset prevention effects of the first vaccination against the Omicron variant are markedly reduced. The hospitalization-preventing effect is reported maintained at a certain level for the first 6 months, but subsequently decreases to 50% or less. On the other hand, it has been reported overseas that a third vaccination restores the infection-preventing, disease onset-preventing and hospitalization-preventing effects against infection with the Omicron variant, and information on how these vaccine effects are attenuated after a third vaccination has become available. Concerning the vaccine against the Omicron variant (BA.4-5), it has been reported that the preventive effect against disease onset was observed within 0 to 2 months (median 1 month) after vaccination.
While the BA.5 lineage continues to be mainstream in the world, there are reports of sublineages of the Omicron variant and recombinants of them with characteristic mutations in the spike protein. They include sublineages of which a predominance in the increasing number of infected patients has been indicated, such as the BQ.1 lineage (sublineage of the BA.5.3 lineage), the XBB lineage (recombinant of the BJ.1 lineage [sublineage of the BA.2.10 lineage] and the BM.1.1.1 lineage [sublineage of the BA.2.75.3 lineage]), and the CH.1.1 lineage (sublineage of the BA.2.75.3 lineage). The proportion of the BQ.1 lineage has increased in Europe, and it is also increasing in Japan. In addition, the XBB.1.5 lineage (sublineages of the XBB lineage) is on an increasing trend in the US. The World Health Organization (WHO), etc., pointed out that the immune escape of these variants probably leads to dominance in the increasing number of infected cases, but the information obtained so far suggest that there is limited epidemiological and clinical knowledge of the infectivity and severity of the XBB.1.5 lineage. There are also no clear findings on the BN.1.2 and BN.1.3 lineages, which have been increasing in Japan. It is necessary to continue to collect data and analyze the situation and findings in other countries regarding these characteristics of the new sublineages and recombinants, and to continue monitoring by genome surveillance.
Figures (Number of new infections reported etc.) (PDF)
116th Meeting of the COVID-19 Advisory Board of the Ministry of Health, Labour and Welfare (February 8, 2023) Material 1
* The number of new cases of infection is an approximate figure per 100,000 of the population, as the total for the current week, which is the reported number in HER-SYS as of Feb. 7, 00:00 AM (the same time point is used for the ratio to the previous week), and the use rate of beds is the secured bed use rate as of the time of writing this document on Feb. 7.
With the promotion of vaccination and natural infection, the proportion of immune carriers against the Omicron variant (BA.5 and BQ1.1) shows an increase in each age group, and it has been reported that the percentage is increasing particularly in the elderly population as a result of vaccination. However, immunity acquired both through vaccination and natural infection is considered to decrease over time, and it may already have declined in elderly people.
The nighttime population has recently increased in many large cities but has decreased in some regions, showing regional differences.
Currently, the BA.5 lineage is the mainstream in Japan, but sublineages of the Omicron variant such as BQ.1 and XBB lineages, particularly XBB.1.5, which has been reported mainly in the US, are considered to have an enhanced ability to escape the immune system, and have been pointed out to predominate among the increasing number of infected people overseas. Particularly regarding the BQ.1 lineage, the proportion is increasing domestically, and close attention is required. The proportion of BN.1.2 and BN.1.3 lineages, which are sublineages of the BA.2.75 lineage, has also increased in Japan.
With a full-fledged winter, temperatures are dropping nationwide, and ventilation may be difficult. Respiratory virus infections also tend to be prevalent in winter.
Re-inspection and implementation of the following basic infection control measures are needed.
It has been confirmed that compared to the Delta variant, the generation time has shortened to approximately 2 days (approximately 5 days for Delta). The doubling time and incubation period have also shortened, the risk of re-infection and secondary infection after infection has increased, and the speed of infection spread is very fast. According to the reported data, pre-symptomatic transmission has probably occurred to some extent as with the previous strains.
In Japan, many cases of infection have occurred through the same opportunities as before (spending time indoors in locations with inadequate ventilation, eating and drinking, etc.), and infection is considered to have occurred via the same routes as before (droplets adhering to the mucosa, aerosol inhalation, contact infection, etc.).
It has been shown that infection with the Omicron variant may present a relatively lower risk of hospitalization and aggravation than with the Delta variant. To evaluate COVID-19, including the Omicron variant, it is not only necessary to assess the severity as a disease but also of the transmissibility and the impact on the medical care system and society as a whole.
Concerning the death toll since the outbreak at the end of 2021, it is reported that the novel coronavirus is not the direct cause of death in quite a number of cases compared to the epidemic in the summer of 2021; for example, when elderly people who had been living in a facility for elderly people since before the infection were infected and died, the death was due to worsening of the underlying disease. There were many cases of serious respiratory failure due to typical viral pneumonia caused by the novel coronavirus infection from the beginning of the novel coronavirus outbreak until the outbreak of the Delta variant. However, during the Omicron variant outbreak, it was reported that other diseases than pneumonia became the main causes of death, such as exacerbation of the underlying disease that had been present before hospitalization and the onset of other complications during hospitalization.
Concerning the spread of infection last summer, there has been a continuing decrease in the rate of severe cases and increase in the ratio of elderly people among hospitalized patients as during the previous outbreak compared to spreading of the infection in the summer of 2021. Among the deaths during the 2022 summer outbreak, mechanical ventilation/nasal high flow use rates and steroid prescription rates were decreased compared to the 2021 outbreak.
Among the fatal cases of infected children who died of endogenous factors, there were some cases without any underlying diseases. The reports on the results of on-site investigations have stated that it is necessary to pay attention to neurological symptoms such as convulsions and disturbance of consciousness, and systemic symptoms such as vomiting and poor oral intake besides the respiratory symptoms.
Among the deaths that occurred at home in July and August last year, approximately 80% of the patients were 70 years and older, which is similar to the trend of all deaths during the same period. It suggests that there were also many deaths caused by other factors than COVID-19. Regarding the situation of handling dead bodies known to be coronavirus positive, the number of cases reported monthly has been the highest during last December. The proportion of deaths due to COVID-19 has recently reached approximately 30% of all deaths. The local governments are developing outpatient medical care and health follow-up systems including medical institutions that provide care or perform examinations. It is important to continuously endeavor to provide the necessary medical care to home care patients.
According to Japanese data, the risk of infection remains until 10 days after the onset, and infectivity is high until 7 days after the onset. Even after waiting for 5 days, a third of the patients are still shedding infectious viruses. On Day 8 (after isolation for 7 days), most patients (approximately 85%) did not shed infectious viruses, and it was reported that even if patients did shed the virus, the amount of virus decreased to one-sixth that in the initial stage of onset after 7 days.
Concerning the conventional vaccine, the infection and disease onset prevention effects of the first vaccination against the Omicron variant are markedly reduced. The hospitalization-preventing effect is reported maintained at a certain level for the first 6 months, but subsequently decreases to 50% or less. On the other hand, it has been reported overseas that a third vaccination restores the infection-preventing, disease onset-preventing and hospitalization-preventing effects against infection with the Omicron variant, and information on how these vaccine effects are attenuated after a third vaccination has become available. Concerning the vaccine against the Omicron variant (BA.4-5), it has been reported that the preventive effect against disease onset was observed within 0 to 2 months (median 1 month) after vaccination.
While the BA.5 lineage continues to be mainstream in the world, there are reports of sublineages of the Omicron variant and recombinants of them with characteristic mutations in the spike protein. They include sublineages of which a predominance in the increasing number of infected patients has been indicated, such as the BQ.1 lineage (sublineage of the BA.5.3 lineage), the XBB lineage (recombinant of the BJ.1 lineage [sublineage of the BA.2.10 lineage] and the BM.1.1.1 lineage [sublineage of the BA.2.75.3 lineage]), and the CH.1.1 lineage (sublineage of the BA.2.75.3 lineage). The proportion of the BQ.1 lineage has increased in Europe, and it is also increasing in Japan. In addition, the XBB.1.5 lineage (sublineages of the XBB lineage) is on an increasing trend in the US. The World Health Organization (WHO), etc., pointed out that the immune escape of these variants probably leads to dominance in the increasing number of infected cases, but the information obtained so far suggest that there is limited epidemiological and clinical knowledge of the infectivity and severity of the XBB.1.5 lineage. There are also no clear findings on the BN.1.2 and BN.1.3 lineages, which have been increasing in Japan. It is necessary to continue to collect data and analyze the situation and findings in other countries regarding these characteristics of the new sublineages and recombinants, and to continue monitoring by genome surveillance.
Figures (Number of new infections reported etc.) (PDF)